Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000008176Uncharacterized protein. (50 aa)    
Predicted Functional Partners:
cunh11orf98
Uncharacterized protein.
   
 
 0.799
rpl36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
   0.675
rpl7a
Ribosomal_L7Ae domain-containing protein.
   
   0.660
rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.660
rpl35
Uncharacterized protein.
   
   0.657
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
   0.653
rpl18a
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.652
ENSCMIP00000045669
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
   0.637
rpl12
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
   0.634
znf593
Zinc finger protein 593.
   
   0.634
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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