STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172358PB1 domain-containing protein. (230 aa)    
Predicted Functional Partners:
ENSCMIP00000036159
TPR_REGION domain-containing protein.
   
 0.959
ENSCMIP00000042148
TPR_REGION domain-containing protein.
   
 0.959
LOC103175997
Uncharacterized protein.
   
 0.848
rac1
Uncharacterized protein.
   
 0.728
LOC103191021
Uncharacterized protein.
   
 0.728
rac3
Uncharacterized protein.
   
 0.728
nox4
Uncharacterized protein.
   
 0.726
vav3
Guanine nucleotide exchange factor VAV3.
   
 
  0.582
vav2
Uncharacterized protein.
   
 
  0.582
cdc42
Cell division control protein 42-like protein.
   
 0.569
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.