STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172996Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
ENSCMIP00000018084
Uncharacterized protein.
  
 
0.667
apob
Vitellogenin domain-containing protein.
   
 
 0.581
LOC103187473
Vitellogenin domain-containing protein.
   
 
 0.581
ENSCMIP00000024223
VWFD domain-containing protein.
   
 
 0.473
ENSCMIP00000024231
Uncharacterized protein.
   
 
 0.473
stard3
Uncharacterized protein.
      
 0.456
LOC103172341
Uncharacterized protein.
      
 0.445
apoh
Uncharacterized protein.
   
  
 0.428
fgg
Fibrinogen gamma polypeptide.
   
 
 0.420
cish
Uncharacterized protein.
      
 0.416
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.