STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172997Zpr1 domain-containing protein. (203 aa)    
Predicted Functional Partners:
rpl9
Uncharacterized protein.
 
 
    0.556
ENSCMIP00000042769
Uncharacterized protein.
  
 
 
 0.542
polr1a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.497
dnajc2
Uncharacterized protein.
   
  
 0.494
wdr3
WD_REPEATS_REGION domain-containing protein.
   
    0.469
ebna1bp2
Uncharacterized protein.
   
  
 0.422
bud13
Uncharacterized protein.
 
 
  
 0.420
ENSCMIP00000003597
Tr-type G domain-containing protein.
    
 
 0.419
LOC103171720
Tr-type G domain-containing protein.
    
 
 0.419
LOC103188690
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.419
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (16%) [HD]