Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vgll4Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
yap1
WW domain-containing protein.
    
 
 0.872
wwtr1
Uncharacterized protein.
    
 
 0.872
tead1
TEA domain-containing protein.
    
 
 0.849
tead3
Transcriptional enhancer factor TEF-5; Transcription factor which plays a key role in the Hippo signaling pathway, a pathway involved in organ size control and tumor suppression by restricting proliferation and promoting apoptosis.
    
 
 0.849
tead2
TEA domain-containing protein.
    
 
 0.849
irf2bpl
IRF-2BP1_2 domain-containing protein.
    
 
 0.759
irf2bp2
IRF-2BP1_2 domain-containing protein.
    
 
 0.759
cenpt
Centromere protein T.
    
 
 0.713
tmem167a
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
      
 0.683
il17re
SEFIR domain-containing protein.
      
 0.666
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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