nelfa protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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co-expression

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[Homology]

Score

nelfa

HDAg domain-containing protein. (557 aa)

Predicted Functional Partners:

nelfe

0.999

nelfb

0.999

nelfcd

0.999

supt5h

0.981

supt4h1

0.968

cdk9

0.966

ighmbp2

0.926

LOC103174263

0.905

polr2c

0.890

ENSCMIP00000002936

0.876

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000002936	LOC103174263	ENSCMIP00000002936	ENSCMIP00000001946	Uncharacterized protein.	Uncharacterized protein.	0.999
ENSCMIP00000002936	cdk9	ENSCMIP00000002936	ENSCMIP00000034259	Uncharacterized protein.	Protein kinase domain-containing protein.	0.700
ENSCMIP00000002936	nelfa	ENSCMIP00000002936	ENSCMIP00000008260	Uncharacterized protein.	HDAg domain-containing protein.	0.876
ENSCMIP00000002936	nelfb	ENSCMIP00000002936	ENSCMIP00000020433	Uncharacterized protein.	Uncharacterized protein.	0.856
ENSCMIP00000002936	nelfcd	ENSCMIP00000002936	ENSCMIP00000036218	Uncharacterized protein.	Uncharacterized protein.	0.856
ENSCMIP00000002936	nelfe	ENSCMIP00000002936	ENSCMIP00000006198	Uncharacterized protein.	Uncharacterized protein.	0.862
ENSCMIP00000002936	polr2c	ENSCMIP00000002936	ENSCMIP00000008812	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
ENSCMIP00000002936	supt4h1	ENSCMIP00000002936	ENSCMIP00000024699	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.988
ENSCMIP00000002936	supt5h	ENSCMIP00000002936	ENSCMIP00000014467	Uncharacterized protein.	Transcription elongation factor SPT5.	0.982
LOC103174263	ENSCMIP00000002936	ENSCMIP00000001946	ENSCMIP00000002936	Uncharacterized protein.	Uncharacterized protein.	0.999
LOC103174263	cdk9	ENSCMIP00000001946	ENSCMIP00000034259	Uncharacterized protein.	Protein kinase domain-containing protein.	0.995
LOC103174263	nelfa	ENSCMIP00000001946	ENSCMIP00000008260	Uncharacterized protein.	HDAg domain-containing protein.	0.905
LOC103174263	nelfb	ENSCMIP00000001946	ENSCMIP00000020433	Uncharacterized protein.	Uncharacterized protein.	0.644
LOC103174263	nelfcd	ENSCMIP00000001946	ENSCMIP00000036218	Uncharacterized protein.	Uncharacterized protein.	0.567
LOC103174263	nelfe	ENSCMIP00000001946	ENSCMIP00000006198	Uncharacterized protein.	Uncharacterized protein.	0.967
LOC103174263	polr2c	ENSCMIP00000001946	ENSCMIP00000008812	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
LOC103174263	supt4h1	ENSCMIP00000001946	ENSCMIP00000024699	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.954
LOC103174263	supt5h	ENSCMIP00000001946	ENSCMIP00000014467	Uncharacterized protein.	Transcription elongation factor SPT5.	0.995
cdk9	ENSCMIP00000002936	ENSCMIP00000034259	ENSCMIP00000002936	Protein kinase domain-containing protein.	Uncharacterized protein.	0.700
cdk9	LOC103174263	ENSCMIP00000034259	ENSCMIP00000001946	Protein kinase domain-containing protein.	Uncharacterized protein.	0.995