Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000008261Uncharacterized protein. (79 aa)    
Predicted Functional Partners:
Lamtor2
Robl_LC7 domain-containing protein.
   
 0.999
lamtor5
Hepatitis B virus X-interacting protein-like protein.
   
 0.999
lamtor3
Uncharacterized protein.
   
 0.999
lamtor4
Uncharacterized protein.
   
 0.992
slc38a9
Uncharacterized protein.
    
 0.991
rptor
WD_REPEATS_REGION domain-containing protein.
    
 0.990
LOC103177256
Uncharacterized protein.
    
 0.987
mlst8
Target of rapamycin complex subunit lst8.
   
 0.952
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.945
ENSCMIP00000018155
Uncharacterized protein.
      
 0.923
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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