STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dync2li1Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
wdr60
Uncharacterized protein.
    
 0.989
wdr34
Uncharacterized protein.
    
 0.944
dynlrb2
Dynein light chain roadblock.
    
 0.930
tctex1d2
Uncharacterized protein.
   
 0.891
dynlrb1
Dynein light chain roadblock.
    
 0.882
ENSCMIP00000029716
Uncharacterized protein.
    
 0.860
ift52
Intraflagellar transport protein 52-like protein.
     
 0.831
ift57
Uncharacterized protein.
     
 0.831
ift80
WD_REPEATS_REGION domain-containing protein.
     
 0.828
ift172
Uncharacterized protein.
     
 0.827
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.