Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dync2li1Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
wdr60
Uncharacterized protein.
    
 0.998
wdr34
Uncharacterized protein.
    
 0.996
tctex1d2
Uncharacterized protein.
   
 0.981
dynlrb2
Dynein light chain roadblock.
    
 0.955
tctex1d1
Uncharacterized protein.
   
 0.907
dynll1
Dynein light chain.
    
 0.905
dynll2
Dynein light chain.
    
 0.905
tctex1d4
Uncharacterized protein.
   
 0.874
ENSCMIP00000029716
Uncharacterized protein.
    
 0.871
dynlt3
Uncharacterized protein.
    
 0.868
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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