STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcg5ABC transporter domain-containing protein. (657 aa)    
Predicted Functional Partners:
abcg8
ABC transporter domain-containing protein.
  
0.999
LOC103181128
ATP-binding cassette sub-family G member 2-like protein.
   
 0.758
LOC103181483
ATP-binding cassette sub-family G member 2-like protein.
   
 0.758
abcg4
ABC transporter domain-containing protein.
   
 0.758
LOC103177674
ATP-binding cassette sub-family G member 2-like protein.
   
 0.758
abcg1
ABC transporter domain-containing protein.
   
 0.758
dhcr7
Uncharacterized protein.
   
 
 0.676
hmgcr
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.666
LOC103173382
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
      
 0.661
LOC103180767
Uncharacterized protein.
    
 
 0.645
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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