Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abcg8ABC transporter domain-containing protein. (683 aa)    
Predicted Functional Partners:
abcg5
ABC transporter domain-containing protein.
  
0.999
acp6
Uncharacterized protein; Belongs to the histidine acid phosphatase family.
   
  
 0.782
tspan3
Tetraspanin.
    
   0.751
Sstr5
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.665
dhcr7
Uncharacterized protein.
   
 
 0.655
fmnl1
Uncharacterized protein.
    
 
 0.636
rer1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
      
 0.633
hmgcr
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.631
LOC103180767
Uncharacterized protein.
    
 
 0.625
LOC103183058
Uncharacterized protein.
    
 
 0.623
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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