STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103181961Uncharacterized protein; Belongs to the semaphorin family. (700 aa)    
Predicted Functional Partners:
plxnb2
Sema domain-containing protein.
    
 0.870
plxnb1
Sema domain-containing protein.
    
 0.870
ptprc
Uncharacterized protein.
    
 0.843
rras2
Uncharacterized protein.
     
 0.766
ENSCMIP00000043212
Sema domain-containing protein.
  
 0.665
ENSCMIP00000003261
Uncharacterized protein.
    
 0.632
rnd3
Rho-related GTP-binding protein RhoE-like protein.
    
 0.632
rock2
Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
     
 0.605
rock1
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
     
 0.605
met
Uncharacterized protein.
   
 0.593
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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