Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ilvblUncharacterized protein; Belongs to the TPP enzyme family. (632 aa)    
Predicted Functional Partners:
cat
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.753
pex5l
TPR_REGION domain-containing protein.
    
 0.751
eci2
ACB domain-containing protein.
   
 0.725
hsdl2
SCP2 domain-containing protein.
  
 0.718
agxt
Serine--pyruvate aminotransferase.
  
 
 0.694
eipr1
WD_REPEATS_REGION domain-containing protein.
      
 0.692
ENSCMIP00000001382
Iso_dh domain-containing protein.
  
 0.691
idh3b
Iso_dh domain-containing protein.
  
 0.691
idh3a
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.691
bcat1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.691
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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