STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103181963CTD small phosphatase-like protein 2. (357 aa)    
Predicted Functional Partners:
Stk35
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.649
pdik1l
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.649
lpin1
LNS2 domain-containing protein.
    
 0.605
lpin3
LNS2 domain-containing protein.
    
 0.605
lpin2
LNS2 domain-containing protein.
    
 0.605
klhdc1
Uncharacterized protein.
   
  
 0.595
cnep1r1
Uncharacterized protein.
   
 0.581
gtf2f2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
 0.565
polr2g
Uncharacterized protein.
    
 0.559
polr2d
RPOL4c domain-containing protein.
    
 0.554
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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