Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000008667Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
fez2
Uncharacterized protein.
   
 
 0.859
fez1
Fasciculation and elongation protein zeta-1-like protein.
   
 
 0.849
psmc5
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.769
arl1
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.739
LOC103175403
Uncharacterized protein.
    
   0.644
prpf38b
Uncharacterized protein.
      
 0.606
dlgap3
Uncharacterized protein.
      
 0.596
necap2
SUZ domain-containing protein.
      
 0.588
arfrp1
Uncharacterized protein.
      
 0.587
pstpip1
Proline-serine-threonine phosphatase-interacting protein 1-like protein.
      
 0.511
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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