STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd151Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (162 aa)    
Predicted Functional Partners:
itga3
Integrin alpha-3; Belongs to the integrin alpha chain family.
    
 0.707
itgb4
Integrin beta.
    
 0.669
ENSCMIP00000010420
Uncharacterized protein.
     
 0.488
ENSCMIP00000010425
Uncharacterized protein.
     
 0.488
megf10
Uncharacterized protein.
     
 0.477
megf11
Uncharacterized protein.
     
 0.477
LOC103171972
Uncharacterized protein; Belongs to the integrin alpha chain family.
    
 0.462
LOC103171582
Uncharacterized protein.
    
 0.462
LOC103176576
Uncharacterized protein; Belongs to the integrin alpha chain family.
    
 0.462
itga6
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.462
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.