vamp7 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

vamp7

Uncharacterized protein; Belongs to the synaptobrevin family. (228 aa)

Predicted Functional Partners:

agfg1

0.973

itsn2

0.967

snap29

0.960

itsn1

0.958

ankrd27

0.929

stx2

0.912

bet1

0.906

ENSCMIP00000041147

0.901

vps16

0.891

ykt6

0.876

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000041147	itsn1	ENSCMIP00000041147	ENSCMIP00000038775	Uncharacterized protein.	Uncharacterized protein.	0.490
ENSCMIP00000041147	itsn2	ENSCMIP00000041147	ENSCMIP00000024182	Uncharacterized protein.	Uncharacterized protein.	0.614
ENSCMIP00000041147	snap29	ENSCMIP00000041147	ENSCMIP00000033321	Uncharacterized protein.	Synaptosomal-associated protein 29.	0.599
ENSCMIP00000041147	stx2	ENSCMIP00000041147	ENSCMIP00000035034	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.882
ENSCMIP00000041147	vamp7	ENSCMIP00000041147	ENSCMIP00000008714	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.901
ENSCMIP00000041147	ykt6	ENSCMIP00000041147	ENSCMIP00000022733	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.425
agfg1	itsn1	ENSCMIP00000018653	ENSCMIP00000038775	Arf-GAP domain-containing protein.	Uncharacterized protein.	0.967
agfg1	itsn2	ENSCMIP00000018653	ENSCMIP00000024182	Arf-GAP domain-containing protein.	Uncharacterized protein.	0.971
agfg1	vamp7	ENSCMIP00000018653	ENSCMIP00000008714	Arf-GAP domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.973
ankrd27	vamp7	ENSCMIP00000037258	ENSCMIP00000008714	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.929
bet1	stx2	ENSCMIP00000040785	ENSCMIP00000035034	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.635
bet1	vamp7	ENSCMIP00000040785	ENSCMIP00000008714	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.906
bet1	ykt6	ENSCMIP00000040785	ENSCMIP00000022733	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.999
itsn1	ENSCMIP00000041147	ENSCMIP00000038775	ENSCMIP00000041147	Uncharacterized protein.	Uncharacterized protein.	0.490
itsn1	agfg1	ENSCMIP00000038775	ENSCMIP00000018653	Uncharacterized protein.	Arf-GAP domain-containing protein.	0.967
itsn1	itsn2	ENSCMIP00000038775	ENSCMIP00000024182	Uncharacterized protein.	Uncharacterized protein.	0.965
itsn1	snap29	ENSCMIP00000038775	ENSCMIP00000033321	Uncharacterized protein.	Synaptosomal-associated protein 29.	0.483
itsn1	vamp7	ENSCMIP00000038775	ENSCMIP00000008714	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.958
itsn2	ENSCMIP00000041147	ENSCMIP00000024182	ENSCMIP00000041147	Uncharacterized protein.	Uncharacterized protein.	0.614
itsn2	agfg1	ENSCMIP00000024182	ENSCMIP00000018653	Uncharacterized protein.	Arf-GAP domain-containing protein.	0.971