Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dock6Uncharacterized protein; Belongs to the DOCK family. (2104 aa)    
Predicted Functional Partners:
cdc42
Cell division control protein 42-like protein.
   
 0.768
Kank2
ANK_REP_REGION domain-containing protein.
   
  
 0.648
arpc3
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
    
 
 0.634
rhoj
Uncharacterized protein.
   
 0.633
rhoq
Uncharacterized protein.
   
 0.633
rhoh
Rho-related GTP-binding protein RhoH-like protein.
   
 0.633
myo6
Myosin-VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.612
arid4b
ARID domain-containing protein.
      
 0.595
igfals
LRRNT domain-containing protein.
   
 
 0.590
rac1
Uncharacterized protein.
   
 0.587
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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