STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsdhl3Beta_HSD domain-containing protein. (438 aa)    
Predicted Functional Partners:
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 0.992
msmo1
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.976
LOC103181227
Uncharacterized protein; Belongs to the cytochrome P450 family.
 
 
 0.966
sqle
Squalene monooxygenase.
   
 
 0.952
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.938
fau
Ubiquitin-like domain-containing protein.
   
 0.935
sc5d
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.914
fdft1
Uncharacterized protein.
  
 
 0.912
dhcr7
Uncharacterized protein.
   
 
 0.909
erg28
Uncharacterized protein.
   
 
 0.849
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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