Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103173104Neur_chan_LBD domain-containing protein. (46 aa)    
Predicted Functional Partners:
LOC103189967
Uncharacterized protein.
  
  0.552
LOC103177743
Uncharacterized protein.
  
  0.509
glrb
Glycine receptor subunit beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.472
glra3
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.443
LOC103174274
Nuclear receptor domain-containing protein.
  
     0.441
glra1
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.417
chrna9
Uncharacterized protein.
  
     0.408
glra2
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   
 0.405
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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