LOC103172432 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC103172432

Uncharacterized protein. (323 aa)

Predicted Functional Partners:

ENSCMIP00000047545

0.900

app

0.876

reln

0.862

ldlr

0.813

vldlr

0.813

LOC103178095

0.813

ENSCMIP00000026678

0.813

itsn2

0.812

itsn1

0.743

cd2ap

0.711

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000026678	ENSCMIP00000047545	ENSCMIP00000026678	ENSCMIP00000047545	Uncharacterized protein.	PID domain-containing protein.	0.813
ENSCMIP00000026678	LOC103172432	ENSCMIP00000026678	ENSCMIP00000008774	Uncharacterized protein.	Uncharacterized protein.	0.813
ENSCMIP00000026678	cd2ap	ENSCMIP00000026678	ENSCMIP00000024493	Uncharacterized protein.	Uncharacterized protein.	0.469
ENSCMIP00000026678	itsn1	ENSCMIP00000026678	ENSCMIP00000038775	Uncharacterized protein.	Uncharacterized protein.	0.484
ENSCMIP00000026678	itsn2	ENSCMIP00000026678	ENSCMIP00000024182	Uncharacterized protein.	Uncharacterized protein.	0.586
ENSCMIP00000026678	reln	ENSCMIP00000026678	ENSCMIP00000032736	Uncharacterized protein.	Uncharacterized protein.	0.892
ENSCMIP00000047545	ENSCMIP00000026678	ENSCMIP00000047545	ENSCMIP00000026678	PID domain-containing protein.	Uncharacterized protein.	0.813
ENSCMIP00000047545	LOC103172432	ENSCMIP00000047545	ENSCMIP00000008774	PID domain-containing protein.	Uncharacterized protein.	0.900
ENSCMIP00000047545	LOC103178095	ENSCMIP00000047545	ENSCMIP00000019857	PID domain-containing protein.	Uncharacterized protein.	0.813
ENSCMIP00000047545	app	ENSCMIP00000047545	ENSCMIP00000042800	PID domain-containing protein.	BPTI/Kunitz inhibitor domain-containing protein.	0.876
ENSCMIP00000047545	cd2ap	ENSCMIP00000047545	ENSCMIP00000024493	PID domain-containing protein.	Uncharacterized protein.	0.711
ENSCMIP00000047545	itsn1	ENSCMIP00000047545	ENSCMIP00000038775	PID domain-containing protein.	Uncharacterized protein.	0.743
ENSCMIP00000047545	itsn2	ENSCMIP00000047545	ENSCMIP00000024182	PID domain-containing protein.	Uncharacterized protein.	0.812
ENSCMIP00000047545	ldlr	ENSCMIP00000047545	ENSCMIP00000005902	PID domain-containing protein.	Uncharacterized protein.	0.813
ENSCMIP00000047545	reln	ENSCMIP00000047545	ENSCMIP00000032736	PID domain-containing protein.	Uncharacterized protein.	0.862
ENSCMIP00000047545	vldlr	ENSCMIP00000047545	ENSCMIP00000019148	PID domain-containing protein.	Uncharacterized protein.	0.813
LOC103172432	ENSCMIP00000026678	ENSCMIP00000008774	ENSCMIP00000026678	Uncharacterized protein.	Uncharacterized protein.	0.813
LOC103172432	ENSCMIP00000047545	ENSCMIP00000008774	ENSCMIP00000047545	Uncharacterized protein.	PID domain-containing protein.	0.900
LOC103172432	LOC103178095	ENSCMIP00000008774	ENSCMIP00000019857	Uncharacterized protein.	Uncharacterized protein.	0.813
LOC103172432	app	ENSCMIP00000008774	ENSCMIP00000042800	Uncharacterized protein.	BPTI/Kunitz inhibitor domain-containing protein.	0.876