Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
foxred1DAO domain-containing protein. (480 aa)    
Predicted Functional Partners:
ndufs5
NADH dehydrogenase (Ubiquinone) iron-sulfur protein 5.
    
 
 0.938
yars2
Tyrosine--tRNA ligase.
   
  
 0.919
gprc5b
G_PROTEIN_RECEP_F3_4 domain-containing protein.
      
 0.914
tmem186
Uncharacterized protein.
   
 
 0.836
acaa2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.810
ndufaf6
Uncharacterized protein.
   
  
 0.797
ndufaf1
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex, assembly factor 1.
   
 
 0.759
gatb
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
   
  
 0.730
dmac2
Uncharacterized protein.
   
 
 0.729
ndufaf5
Methyltransf_11 domain-containing protein.
      
 0.689
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.