Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
morn1Uncharacterized protein. (507 aa)    
Predicted Functional Partners:
tbccd1
C-CAP/cofactor C-like domain-containing protein.
      
 0.919
morn5
Uncharacterized protein.
      
 0.692
wac
WW domain-containing protein.
      
 0.673
tmtc3
TPR_REGION domain-containing protein.
    
 
 0.654
tmem52
Transmembrane protein 52.
      
 0.650
ENSCMIP00000028384
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
   
  
 0.613
stap2
Uncharacterized protein.
      
 0.590
ttc34
Uncharacterized protein.
      
 0.589
ndc80
Kinetochore protein NDC80-like protein.
      
 0.587
LOC103184088
VPS9 domain-containing protein.
    
 0.580
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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