STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cortactinUncharacterized protein. (162 aa)    
Predicted Functional Partners:
gosr1
Uncharacterized protein.
   
 0.730
stx5
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.720
pkn1
Uncharacterized protein.
   
 0.684
uso1
General vesicular transport factor p115.
   
 0.677
acbd3
Uncharacterized protein.
    
 0.674
golga2
Uncharacterized protein.
   
 
 0.673
pkn2
Uncharacterized protein.
   
 0.575
ift20
Uncharacterized protein.
   
 0.535
rab11b
Uncharacterized protein.
   
 0.512
Rab11a
Uncharacterized protein.
   
 0.512
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.