STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
depdc5DEP domain-containing protein. (1527 aa)    
Predicted Functional Partners:
nprl2
Uncharacterized protein.
    
 0.998
wdr59
Uncharacterized protein.
   
 0.997
mios
Zinc_ribbon_16 domain-containing protein.
   
 0.997
itfg2
Uncharacterized protein.
    
 0.987
sec13
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.985
LOC103177256
Uncharacterized protein.
    
 0.984
LOC103179817
Uncharacterized protein.
   
 0.982
ENSCMIP00000000249
Uncharacterized protein.
    
 0.981
szt2
Uncharacterized protein.
    
 0.978
ENSCMIP00000005477
Uncharacterized protein.
    
 0.971
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.