STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000008942Ig-like domain-containing protein. (228 aa)    
Predicted Functional Partners:
ENSCMIP00000004961
Uncharacterized protein.
   
  
 0.586
LOC103182004
Uncharacterized protein.
      
 0.551
LOC103175602
Uncharacterized protein.
   
  
 0.526
cldn5
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.522
ENSCMIP00000039780
Link domain-containing protein.
   
  
 0.487
Atox1
Uncharacterized protein.
      
 0.474
LOC103175926
Cytochrome c oxidase subunit 4 isoform 1.
   
  
 0.427
pdlim3
Uncharacterized protein.
      
 0.410
LOC103185829
Uncharacterized protein.
      
 0.410
LOC103177716
Uncharacterized protein.
      
 0.404
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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