Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nit1CN hydrolase domain-containing protein. (348 aa)    
Predicted Functional Partners:
fhit
Bis(5'-adenosyl)-triphosphatase.
    
 0.935
lexm
Uncharacterized protein.
      
 0.793
tdp2
Endo/exonuclease/phosphatase domain-containing protein.
      
 0.682
foxred1
DAO domain-containing protein.
      
 0.661
rnls
Amino_oxidase domain-containing protein.
      
 0.626
ENSCMIP00000004162
DNA_pol_E_B domain-containing protein.
      
 0.607
pola2
Uncharacterized protein.
      
 0.607
bpnt1
Uncharacterized protein.
   
  
 0.560
srm
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 
 0.540
sms
PABS domain-containing protein.
  
 
 0.540
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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