Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rab36Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
vps53
Vps53_N domain-containing protein.
    
 0.844
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.823
ric1
RIC1 domain-containing protein.
   
 0.804
ENSCMIP00000004945
Uncharacterized protein.
    
 0.799
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.791
rgp1
Uncharacterized protein.
    
 0.769
arl1
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.745
vps52
Uncharacterized protein.
    
 0.738
LOC103173852
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.656
gdi2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.656
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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