Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173140Fibronectin type-III domain-containing protein. (237 aa)    
Predicted Functional Partners:
pros1
Uncharacterized protein.
     
 0.842
gas6
Uncharacterized protein.
    
 0.715
nrp2
Neuropilin; Belongs to the neuropilin family.
      
 0.626
ENSCMIP00000040448
PKD domain-containing protein.
   
 
 0.620
traf6
TNF receptor-associated factor.
   
 0.609
Tmem119
Uncharacterized protein.
   
  
 0.609
cst7
Cystatin domain-containing protein.
   
  
 0.595
nlk
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.546
ENSCMIP00000004283
PPM-type phosphatase domain-containing protein.
   
 0.533
tab1
PPM-type phosphatase domain-containing protein.
   
 0.533
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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