rnaseh2c protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

rnaseh2c

Uncharacterized protein. (135 aa)

Predicted Functional Partners:

rnaseh2a

0.998

rnaseh2b

0.998

samhd1

0.838

LOC103173653

0.771

LOC103186085

0.681

ctdp1

0.668

ENSCMIP00000004389

0.647

ENSCMIP00000003165

0.639

ENSCMIP00000003174

0.617

ENSCMIP00000029420

0.586

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000003165	ENSCMIP00000004389	ENSCMIP00000003165	ENSCMIP00000004389	Uncharacterized protein.	PCNA_N domain-containing protein.	0.991
ENSCMIP00000003165	LOC103173653	ENSCMIP00000003165	ENSCMIP00000003658	Uncharacterized protein.	Uncharacterized protein.	0.936
ENSCMIP00000003165	rnaseh2a	ENSCMIP00000003165	ENSCMIP00000011365	Uncharacterized protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.847
ENSCMIP00000003165	rnaseh2b	ENSCMIP00000003165	ENSCMIP00000013036	Uncharacterized protein.	Uncharacterized protein.	0.716
ENSCMIP00000003165	rnaseh2c	ENSCMIP00000003165	ENSCMIP00000009054	Uncharacterized protein.	Uncharacterized protein.	0.639
ENSCMIP00000003174	rnaseh2a	ENSCMIP00000003174	ENSCMIP00000011365	Uncharacterized protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.477
ENSCMIP00000003174	rnaseh2b	ENSCMIP00000003174	ENSCMIP00000013036	Uncharacterized protein.	Uncharacterized protein.	0.477
ENSCMIP00000003174	rnaseh2c	ENSCMIP00000003174	ENSCMIP00000009054	Uncharacterized protein.	Uncharacterized protein.	0.617
ENSCMIP00000004389	ENSCMIP00000003165	ENSCMIP00000004389	ENSCMIP00000003165	PCNA_N domain-containing protein.	Uncharacterized protein.	0.991
ENSCMIP00000004389	ENSCMIP00000029420	ENSCMIP00000004389	ENSCMIP00000029420	PCNA_N domain-containing protein.	PALB2_WD40 domain-containing protein.	0.581
ENSCMIP00000004389	LOC103173653	ENSCMIP00000004389	ENSCMIP00000003658	PCNA_N domain-containing protein.	Uncharacterized protein.	0.998
ENSCMIP00000004389	rnaseh2a	ENSCMIP00000004389	ENSCMIP00000011365	PCNA_N domain-containing protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.914
ENSCMIP00000004389	rnaseh2b	ENSCMIP00000004389	ENSCMIP00000013036	PCNA_N domain-containing protein.	Uncharacterized protein.	0.879
ENSCMIP00000004389	rnaseh2c	ENSCMIP00000004389	ENSCMIP00000009054	PCNA_N domain-containing protein.	Uncharacterized protein.	0.647
ENSCMIP00000029420	ENSCMIP00000004389	ENSCMIP00000029420	ENSCMIP00000004389	PALB2_WD40 domain-containing protein.	PCNA_N domain-containing protein.	0.581
ENSCMIP00000029420	rnaseh2a	ENSCMIP00000029420	ENSCMIP00000011365	PALB2_WD40 domain-containing protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.770
ENSCMIP00000029420	rnaseh2c	ENSCMIP00000029420	ENSCMIP00000009054	PALB2_WD40 domain-containing protein.	Uncharacterized protein.	0.586
LOC103173653	ENSCMIP00000003165	ENSCMIP00000003658	ENSCMIP00000003165	Uncharacterized protein.	Uncharacterized protein.	0.936
LOC103173653	ENSCMIP00000004389	ENSCMIP00000003658	ENSCMIP00000004389	Uncharacterized protein.	PCNA_N domain-containing protein.	0.998
LOC103173653	rnaseh2a	ENSCMIP00000003658	ENSCMIP00000011365	Uncharacterized protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.924