Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arl2Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
pde6d
GMP_PDE_delta domain-containing protein.
   
 0.860
tbcb
Tubulin-folding cofactor B-like protein.
   
 
 0.860
tbcd
TFCD_C domain-containing protein.
    
 0.856
tbce
CAP-Gly domain-containing protein.
    
 
 0.849
arl2bp
ARL2_Bind_BART domain-containing protein.
   
 0.831
unc119
GMP_PDE_delta domain-containing protein.
    
 
 0.713
tbcc
C-CAP/cofactor C-like domain-containing protein.
    
 
 0.650
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
    
 
 0.650
unc119b
GMP_PDE_delta domain-containing protein.
    
 
 0.494
rab23
Ras-related protein Rab-23-like protein.
      
 0.432
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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