Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173171MIT domain-containing protein. (246 aa)    
Predicted Functional Partners:
use1
Uncharacterized protein.
    
 0.746
stx18
Syntaxin-18_N domain-containing protein.
    
 0.745
rint1
Uncharacterized protein.
    
 0.724
zw10
Centromere/kinetochore protein zw10.
   
 0.708
nbas
Uncharacterized protein.
    
 0.690
copb2
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.491
nsf
Uncharacterized protein.
    
 0.489
ykt6
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.485
scfd1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.426
sec22b
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.404
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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