STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000009079TGF_BETA_2 domain-containing protein. (162 aa)    
Predicted Functional Partners:
ret
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
     
 0.804
nrtn
TGF_BETA_2 domain-containing protein.
  
  
0.712
gfra4
Uncharacterized protein.
    
 0.674
Gdnf
TGF_BETA_2 domain-containing protein.
  
  
0.655
Gfral
Uncharacterized protein.
     
 0.582
ENSCMIP00000039932
GDNF domain-containing protein.
     
 0.582
gab1
PH domain-containing protein.
     
 0.539
LOC103172571
IRS-type PTB domain-containing protein.
     
 0.536
Sdc3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
      
 0.513
dok5
IRS-type PTB domain-containing protein.
     
 0.498
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.