STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eef1dEF1_GNE domain-containing protein. (238 aa)    
Predicted Functional Partners:
eef1g
Uncharacterized protein; Belongs to the GST superfamily.
  
 0.999
eef1b2
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
  
0.987
ENSCMIP00000002712
tRNA-synt_1 domain-containing protein.
   
 0.974
tpt1
Translationally-controlled tumor protein-like isoform 1; Belongs to the TCTP family.
  
 
 0.907
farsb
B5 domain-containing protein.
 
 
    0.903
mars1
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.890
ENSCMIP00000042769
Uncharacterized protein.
  
 0.869
rpl35
Uncharacterized protein.
  
 
 0.840
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.827
rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.821
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.