Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eef1dEF1_GNE domain-containing protein. (238 aa)    
Predicted Functional Partners:
eef1g
Uncharacterized protein; Belongs to the GST superfamily.
  
 0.999
eef1b2
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
  
0.999
tpt1
Translationally-controlled tumor protein-like isoform 1; Belongs to the TCTP family.
  
 
 0.984
rpl14
Ribosomal_L14e domain-containing protein.
   
 
 0.981
rpl7a
Ribosomal_L7Ae domain-containing protein.
   
 
 0.977
abtb1
Uncharacterized protein.
    
 
 0.966
rps3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.960
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.957
rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.951
rpl12
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.944
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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