Erh protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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[Homology]

Score

Erh

Uncharacterized protein. (128 aa)

Predicted Functional Partners:

LOC103172466

0.950

chtop

0.944

ENSCMIP00000026134

0.915

snrpf

0.812

ciz1

0.801

snrpg

0.799

alyref

0.795

snrpe

0.793

snrpd3

0.791

snrpd1

0.783

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000026134	Erh	ENSCMIP00000026134	ENSCMIP00000009157	Uncharacterized protein.	Uncharacterized protein.	0.915
Erh	ENSCMIP00000026134	ENSCMIP00000009157	ENSCMIP00000026134	Uncharacterized protein.	Uncharacterized protein.	0.915
Erh	LOC103172466	ENSCMIP00000009157	ENSCMIP00000009070	Uncharacterized protein.	Uncharacterized protein.	0.950
Erh	alyref	ENSCMIP00000009157	ENSCMIP00000048764	Uncharacterized protein.	RRM domain-containing protein.	0.795
Erh	chtop	ENSCMIP00000009157	ENSCMIP00000010326	Uncharacterized protein.	FoP_duplication domain-containing protein.	0.944
Erh	ciz1	ENSCMIP00000009157	ENSCMIP00000038443	Uncharacterized protein.	Matrin-type domain-containing protein.	0.801
Erh	snrpd1	ENSCMIP00000009157	ENSCMIP00000024695	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.783
Erh	snrpd3	ENSCMIP00000009157	ENSCMIP00000030273	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.791
Erh	snrpe	ENSCMIP00000009157	ENSCMIP00000037778	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.793
Erh	snrpf	ENSCMIP00000009157	ENSCMIP00000035707	Uncharacterized protein.	Sm domain-containing protein.	0.812
Erh	snrpg	ENSCMIP00000009157	ENSCMIP00000013211	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.799
LOC103172466	Erh	ENSCMIP00000009070	ENSCMIP00000009157	Uncharacterized protein.	Uncharacterized protein.	0.950
LOC103172466	alyref	ENSCMIP00000009070	ENSCMIP00000048764	Uncharacterized protein.	RRM domain-containing protein.	0.823
LOC103172466	chtop	ENSCMIP00000009070	ENSCMIP00000010326	Uncharacterized protein.	FoP_duplication domain-containing protein.	0.968
LOC103172466	snrpd1	ENSCMIP00000009070	ENSCMIP00000024695	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.485
LOC103172466	snrpd3	ENSCMIP00000009070	ENSCMIP00000030273	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.642
LOC103172466	snrpe	ENSCMIP00000009070	ENSCMIP00000037778	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.660
LOC103172466	snrpf	ENSCMIP00000009070	ENSCMIP00000035707	Uncharacterized protein.	Sm domain-containing protein.	0.690
LOC103172466	snrpg	ENSCMIP00000009070	ENSCMIP00000013211	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.649
alyref	Erh	ENSCMIP00000048764	ENSCMIP00000009157	RRM domain-containing protein.	Uncharacterized protein.	0.795