STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc32Tetratricopeptide repeat protein 32. (138 aa)    
Predicted Functional Partners:
wdr35
WD repeat-containing protein 35.
 
  
 0.742
leo1
RNA polymerase-associated protein LEO1.
    
 0.729
commd4
COMM domain-containing protein 4-like protein.
   
  
 0.598
bbs9
Uncharacterized protein.
    
 0.574
ints13
Cell cycle regulator Mat89Bb-like protein.
   
 0.552
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.542
ints1
DUF3677 domain-containing protein.
    
 0.540
ints11
Uncharacterized protein.
   
 0.516
ttc8
TPR_REGION domain-containing protein.
    
 0.512
rbbp5
WD_REPEATS_REGION domain-containing protein.
    
 0.497
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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