STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galcGlyco_hydro_59M domain-containing protein. (663 aa)    
Predicted Functional Partners:
arsa
Sulfatase domain-containing protein.
     
 0.953
asah1
Uncharacterized protein; Belongs to the acid ceramidase family.
     
 0.953
gba
Glyco_hydro_30C domain-containing protein.
     
 0.930
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
     
 0.930
LOC103181594
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
 0.924
LOC103188741
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like protein; Belongs to the UDP-glycosyltransferase family.
     
 0.924
gal3st1
Uncharacterized protein.
     
 0.920
LOC103180876
Neutral ceramidase.
     
 0.919
plpp2
Phosphatidic acid phosphatase type 2C.
     
 0.918
ugcg
Ceramide glucosyltransferase.
     
 0.918
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.