STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000009202FHA domain-containing protein. (94 aa)    
Predicted Functional Partners:
atm
Non-specific serine/threonine protein kinase.
   
 0.862
nbn
Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis.
    
 0.822
kdm6a
Uncharacterized protein.
    
 0.817
smc6
Structural maintenance of chromosomes protein 6.
   
 
 0.806
ENSCMIP00000002751
TPR_REGION domain-containing protein.
    
 0.805
Pwwp2a
PWWP domain-containing protein 2A.
   
 0.794
ENSCMIP00000017989
BRCT domain-containing protein.
    
 0.783
tp53bp1
Uncharacterized protein.
    
 0.783
rbbp5
WD_REPEATS_REGION domain-containing protein.
   
 0.783
fancm
Uncharacterized protein.
   
 
 0.776
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.