STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000009214AA_permease domain-containing protein. (595 aa)    
Predicted Functional Partners:
LOC103172740
Uncharacterized protein.
 
     0.951
LOC103173420
SLC12 domain-containing protein.
 
      0.900
LOC103172622
SLC12 domain-containing protein.
 
      0.692
ENSCMIP00000044021
Uncharacterized protein.
    
 0.494
ENSCMIP00000014831
Protein kinase domain-containing protein.
    
 
 0.475
ENSCMIP00000014835
Uncharacterized protein.
    
 
 0.475
stk39
Protein kinase domain-containing protein.
    
 
 0.475
ENSCMIP00000019517
Protein kinase domain-containing protein.
    
 
 0.475
kcnj1
ATP-sensitive inward rectifier potassium channel 1.
   
  
 0.422
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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