STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc3a1Aamy domain-containing protein. (706 aa)    
Predicted Functional Partners:
ENSCMIP00000029171
Uncharacterized protein.
   
 0.830
ENSCMIP00000029173
Uncharacterized protein.
   
 0.830
ENSCMIP00000036916
Uncharacterized protein.
   
 0.830
slc7a9
Uncharacterized protein.
   
 0.830
LOC103180246
Uncharacterized protein.
   
 0.830
LOC103185915
Uncharacterized protein.
   
 0.741
slc7a7
Uncharacterized protein.
   
 0.741
gbe1
Aamy domain-containing protein.
  
 
 0.724
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.683
LOC103190541
Uncharacterized protein.
   
 0.675
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.