STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pip5k1aPIPK domain-containing protein. (519 aa)    
Predicted Functional Partners:
gpsm2
Uncharacterized protein.
    
 
 0.726
tlnrd1
Uncharacterized protein.
    
 0.684
tln2
Uncharacterized protein.
    
 0.684
tln1
Uncharacterized protein.
    
 0.684
sec61g
Uncharacterized protein.
   
 
 0.648
farp1
Uncharacterized protein.
     
 0.510
farp2
Uncharacterized protein.
     
 0.510
pin1
WW domain-containing protein.
    
 0.486
pip4k2a
PIPK domain-containing protein.
     
0.463
pip4k2b
Phosphatidylinositol-5-phosphate 4-kinase type-2 beta-like protein.
     
0.463
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.