Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103172488SIX1_SD domain-containing protein. (153 aa)    
Predicted Functional Partners:
eya1
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.565
eya2
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.565
eya3
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.565
eya4
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
   
 0.565
ENSCMIP00000005333
Paired domain-containing protein.
  
  
 0.550
ENSCMIP00000001595
Paired domain-containing protein.
  
  
 0.519
ENSCMIP00000000649
Paired domain-containing protein.
  
  
 0.512
ENSCMIP00000040915
Uncharacterized protein.
   
  
 0.495
Pax4
Paired domain-containing protein.
  
  
 0.487
lhx5
LIM/homeobox protein Lhx5.
      
 0.471
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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