STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ier3ip1Immediate early response 3-interacting protein 1. (82 aa)    
Predicted Functional Partners:
yif1b
Protein YIF1B-B.
    
 
 0.642
wdr26
Uncharacterized protein.
      
 0.615
yipf6
Protein YIPF.
      
 0.553
Rabac1
PRA1 family protein.
      
 0.551
tmem167a
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
   0.533
yipf5
Protein YIPF.
   
 
 0.531
yipf7
Protein YIPF5.
   
 
 0.531
selenos
Uncharacterized protein.
   
 
 0.519
ENSCMIP00000003385
Uncharacterized protein.
    
 
 0.488
ebp
EXPERA domain-containing protein.
      
 0.474
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.