Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ier3ip1Immediate early response 3-interacting protein 1. (82 aa)    
Predicted Functional Partners:
wdr26
Uncharacterized protein.
      
 0.861
tmem167a
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
 
 0.734
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
  
 0.701
LOC103172233
RNA-binding protein 4B.
      
 0.692
srrm1
PWI domain-containing protein.
      
 0.686
yipf5
Protein YIPF.
   
 
 0.679
yipf7
Protein YIPF5.
   
 
 0.679
slc25a40
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.678
yipf6
Protein YIPF.
      
 0.670
ebp
EXPERA domain-containing protein.
      
 0.669
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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