STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps18aMitochondrial ribosomal protein S18A. (193 aa)    
Predicted Functional Partners:
mrps18c
Mitochondrial ribosomal protein S18C.
   
 0.997
mrps14
Uncharacterized protein.
   
 0.971
mrpl21
Uncharacterized protein.
   
 
 0.967
mrps30
Uncharacterized protein.
   
 0.967
mrpl47
Uncharacterized protein.
   
 
 0.965
mrps18b
Uncharacterized protein.
   
 0.964
mrps16
Uncharacterized protein.
   
 0.962
mrps33
28S ribosomal protein S33, mitochondrial-like protein.
   
 0.962
mrps11
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.959
Mrps15
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 0.959
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.