rsph9 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

rsph9

Uncharacterized protein. (274 aa)

Predicted Functional Partners:

gak

0.973

rsph6a

0.956

rsph1

0.926

rsph3

0.759

LOC103191386

0.715

ap1g1

0.715

ap4e1

0.715

ap1b1

0.707

ap2b1

0.707

ap4b1

0.707

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103191386	ap1b1	ENSCMIP00000034434	ENSCMIP00000015837	AP-1 complex subunit gamma.	Uncharacterized protein.	0.988
LOC103191386	ap1g1	ENSCMIP00000034434	ENSCMIP00000036867	AP-1 complex subunit gamma.	AP-1 complex subunit gamma.	0.901
LOC103191386	ap2b1	ENSCMIP00000034434	ENSCMIP00000041247	AP-1 complex subunit gamma.	AP complex subunit beta.	0.927
LOC103191386	ap4b1	ENSCMIP00000034434	ENSCMIP00000041256	AP-1 complex subunit gamma.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.901
LOC103191386	ap4e1	ENSCMIP00000034434	ENSCMIP00000047112	AP-1 complex subunit gamma.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.650
LOC103191386	gak	ENSCMIP00000034434	ENSCMIP00000014450	AP-1 complex subunit gamma.	Uncharacterized protein.	0.984
LOC103191386	rsph9	ENSCMIP00000034434	ENSCMIP00000009474	AP-1 complex subunit gamma.	Uncharacterized protein.	0.715
ap1b1	LOC103191386	ENSCMIP00000015837	ENSCMIP00000034434	Uncharacterized protein.	AP-1 complex subunit gamma.	0.988
ap1b1	ap1g1	ENSCMIP00000015837	ENSCMIP00000036867	Uncharacterized protein.	AP-1 complex subunit gamma.	0.988
ap1b1	ap4b1	ENSCMIP00000015837	ENSCMIP00000041256	Uncharacterized protein.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.639
ap1b1	ap4e1	ENSCMIP00000015837	ENSCMIP00000047112	Uncharacterized protein.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.898
ap1b1	gak	ENSCMIP00000015837	ENSCMIP00000014450	Uncharacterized protein.	Uncharacterized protein.	0.984
ap1b1	rsph9	ENSCMIP00000015837	ENSCMIP00000009474	Uncharacterized protein.	Uncharacterized protein.	0.707
ap1g1	LOC103191386	ENSCMIP00000036867	ENSCMIP00000034434	AP-1 complex subunit gamma.	AP-1 complex subunit gamma.	0.901
ap1g1	ap1b1	ENSCMIP00000036867	ENSCMIP00000015837	AP-1 complex subunit gamma.	Uncharacterized protein.	0.988
ap1g1	ap2b1	ENSCMIP00000036867	ENSCMIP00000041247	AP-1 complex subunit gamma.	AP complex subunit beta.	0.927
ap1g1	ap4b1	ENSCMIP00000036867	ENSCMIP00000041256	AP-1 complex subunit gamma.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.901
ap1g1	ap4e1	ENSCMIP00000036867	ENSCMIP00000047112	AP-1 complex subunit gamma.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.650
ap1g1	gak	ENSCMIP00000036867	ENSCMIP00000014450	AP-1 complex subunit gamma.	Uncharacterized protein.	0.984
ap1g1	rsph9	ENSCMIP00000036867	ENSCMIP00000009474	AP-1 complex subunit gamma.	Uncharacterized protein.	0.715