haus5 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

haus5

Uncharacterized protein. (293 aa)

Predicted Functional Partners:

haus3

0.999

haus8

0.998

haus7

0.996

haus2

0.989

ENSCMIP00000016512

0.976

ENSCMIP00000016513

0.976

Haus6

0.976

hnrnpk

0.847

LOC103176727

0.842

snrpf

0.797

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000016512	LOC103176727	ENSCMIP00000016512	ENSCMIP00000049270	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.925
ENSCMIP00000016512	haus2	ENSCMIP00000016512	ENSCMIP00000041132	Uncharacterized protein.	Uncharacterized protein.	0.944
ENSCMIP00000016512	haus3	ENSCMIP00000016512	ENSCMIP00000038629	Uncharacterized protein.	HAUS augmin-like complex subunit 3.	0.977
ENSCMIP00000016512	haus5	ENSCMIP00000016512	ENSCMIP00000009487	Uncharacterized protein.	Uncharacterized protein.	0.976
ENSCMIP00000016512	haus7	ENSCMIP00000016512	ENSCMIP00000019483	Uncharacterized protein.	Uncharacterized protein.	0.968
ENSCMIP00000016512	haus8	ENSCMIP00000016512	ENSCMIP00000006930	Uncharacterized protein.	Uncharacterized protein.	0.962
ENSCMIP00000016513	LOC103176727	ENSCMIP00000016513	ENSCMIP00000049270	HAUS6_N domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.925
ENSCMIP00000016513	haus2	ENSCMIP00000016513	ENSCMIP00000041132	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.944
ENSCMIP00000016513	haus3	ENSCMIP00000016513	ENSCMIP00000038629	HAUS6_N domain-containing protein.	HAUS augmin-like complex subunit 3.	0.977
ENSCMIP00000016513	haus5	ENSCMIP00000016513	ENSCMIP00000009487	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.976
ENSCMIP00000016513	haus7	ENSCMIP00000016513	ENSCMIP00000019483	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.968
ENSCMIP00000016513	haus8	ENSCMIP00000016513	ENSCMIP00000006930	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.962
Haus6	LOC103176727	ENSCMIP00000016516	ENSCMIP00000049270	HAUS6_N domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.925
Haus6	haus2	ENSCMIP00000016516	ENSCMIP00000041132	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.944
Haus6	haus3	ENSCMIP00000016516	ENSCMIP00000038629	HAUS6_N domain-containing protein.	HAUS augmin-like complex subunit 3.	0.977
Haus6	haus5	ENSCMIP00000016516	ENSCMIP00000009487	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.976
Haus6	haus7	ENSCMIP00000016516	ENSCMIP00000019483	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.968
Haus6	haus8	ENSCMIP00000016516	ENSCMIP00000006930	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.962
LOC103176727	ENSCMIP00000016512	ENSCMIP00000049270	ENSCMIP00000016512	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.925
LOC103176727	ENSCMIP00000016513	ENSCMIP00000049270	ENSCMIP00000016513	WD_REPEATS_REGION domain-containing protein.	HAUS6_N domain-containing protein.	0.925