STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map3k4Protein kinase domain-containing protein. (1635 aa)    
Predicted Functional Partners:
gadd45g
Growth arrest and DNA-damage-inducible, gamma.
    
 0.968
LOC103185143
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
0.949
Gadd45a
Ribosomal_L7Ae domain-containing protein.
    
 0.948
gadd45b
Ribosomal_L7Ae domain-containing protein.
    
 0.948
chac2
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
      
 0.775
asb3
Uncharacterized protein.
    
 
 0.746
map2k5
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 
0.717
map2k1
Dual specificity mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
   
 
0.712
map2k2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
0.712
agpat4
PlsC domain-containing protein.
      
 0.694
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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