Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tspan6Tetraspanin. (250 aa)    
Predicted Functional Partners:
pick1
AH domain-containing protein.
    
 0.665
sh2d7
SH2 domain-containing protein.
      
 0.651
tsg101
Uncharacterized protein.
      
 0.554
dhrs13
Uncharacterized protein.
      
 0.540
tspan31
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.525
rab14
Uncharacterized protein.
    
 0.503
dhrs7b
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.462
ttc1
TPR_REGION domain-containing protein.
      
 0.449
atpaf1
ATP synthase mitochondrial F1 complex assembly factor 1.
      
 0.442
tspan13
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.426
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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