Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prdm10PR domain zinc finger protein 10. (1157 aa)    
Predicted Functional Partners:
znhit2
HIT-type domain-containing protein.
    
 
 0.604
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.586
chst14
Carbohydrate sulfotransferase.
      
 0.544
kif18a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.508
osgepl1
Peptidase_M22 domain-containing protein.
      
 0.479
asphd2
Asp_Arg_Hydrox domain-containing protein.
      
 0.467
agk
Acylglycerol kinase, mitochondrial.
    
 
 0.462
disp1
SSD domain-containing protein.
      
 0.445
setd4
SET domain-containing protein.
    
 0.438
prdm16
Uncharacterized protein.
   
0.431
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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