Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000009650Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
ENSCMIP00000009663
SAM domain-containing protein.
 
 
  0.942
ENSCMIP00000003750
PDZ domain-containing protein.
 
  
  0.912
ENSCMIP00000006207
ANK_REP_REGION domain-containing protein.
 
  
  0.912
ENSCMIP00000006204
Uncharacterized protein.
 
  
  0.882
dlgap5
Uncharacterized protein.
   
 0.729
dlgap3
Uncharacterized protein.
   
 0.729
Dlgap4
Uncharacterized protein.
   
 0.729
ENSCMIP00000037829
Uncharacterized protein.
   
 0.729
dlgap2
Uncharacterized protein.
   
 0.729
ENSCMIP00000041329
Uncharacterized protein.
   
 0.729
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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