STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172519Protein kinase domain-containing protein. (156 aa)    
Predicted Functional Partners:
LOC103190693
Fibroblast growth factor receptor.
 
      0.900
ENSCMIP00000011754
Uncharacterized protein.
 
      0.899
ENSCMIP00000001653
Uncharacterized protein; Belongs to the heparin-binding growth factors family.
    
 0.662
grb2
Uncharacterized protein.
   
 0.635
frs3
IRS-type PTB domain-containing protein.
    
 0.604
frs2
IRS-type PTB domain-containing protein.
    
 0.604
fgf1
Multifunctional fusion protein; Plays an important role in the regulation of cell survival, cell division, angiogenesis, cell differentiation and cell migration. Functions as potent mitogen in vitro. Acts as a ligand for FGFR1 and integrins. Binds to FGFR1 in the presence of heparin leading to FGFR1 dimerization and activation via sequential autophosphorylation on tyrosine residues which act as docking sites for interacting proteins, leading to the activation of several signaling cascades. Binds to integrins. Its binding to integrins and subsequent ternary complex formation with integr [...]
    
 0.583
fgf9
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.583
fgf20
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.583
fgf16
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.583
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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